BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C10SP1|AL425672
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1553 0.0
>3x_Contig1786
Length = 33838
Score = 1553 bits (782), Expect = 0.0
Identities = 794/798 (99%), Gaps = 1/798 (0%)
Strand = Plus / Plus
Query: 1 gataattacagtcaaaggtgtttctaagacaatcatagaacctgcgtyggattgggatga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 27587 gataattacagtcaaaggtgtttctaagacaatcatagaacctgcgtcggattgggatga 27646
Query: 61 ctccaaaaaggtaaccatcaacgaaacagagaacattgcagaagaacacaatgaatcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27647 ctccaaaaaggtaaccatcaacgaaacagagaacattgcagaagaacacaatgaatcatc 27706
Query: 121 aagtatagactcgaatactacgaacactcacgctcatccgcgatccccttcgtcaagacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27707 aagtatagactcgaatactacgaacactcacgctcatccgcgatccccttcgtcaagacg 27766
Query: 181 tggatccagattcagtctttggtcaagcaaatcttcacaaaatgaccaagattcaaacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27767 tggatccagattcagtctttggtcaagcaaatcttcacaaaatgaccaagattcaaacgc 27826
Query: 241 taaacagctgtyaaaatctcaagaaagcttcaacctcgaatccagatccaaagattaatt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27827 taaacagctgtcaaaatctcaagaaagcttcaacctcgaatccagatccaaagattaatt 27886
Query: 301 tattcacaactttcctcatcacaacacctacatacatctataaatgcgcactcacaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27887 tattcacaactttcctcatcacaacacctacatacatctataaatgcgcactcacaagca 27946
Query: 361 tgaagacatttcgataagttaacttcggagttgctaaaagttcacatatagtctttcgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27947 tgaagacatttcgataagttaacttcggagttgctaaaagttcacatatagtctttcgac 28006
Query: 421 aaacattagatagactatgatatgcatatctttcagttttaagctcaaagctatactaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28007 aaacattagatagactatgatatgcatatctttcagttttaagctcaaagctatactaat 28066
Query: 481 tacatccgattagcactcatattcttcagctgtatcgttgcatagatccgttccatcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28067 tacatccgattagcactcatattcttcagctgtatcgttgcatagatccgttccatcatc 28126
Query: 541 gcacatgctttcttgtgctcattctctcgtatattttgtgtttccgtcttaattccattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28127 gcacatgctttcttgtgctcattctctcgtatattttgtgtttccgtcttaattccattt 28186
Query: 601 ccactctctttcttccacggtatgacaatttcgttcaaaatggttaaataaggattttct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28187 ccactctctttcttccacggtatgacaatttcgttcaaaatggttaaataaggattttct 28246
Query: 661 aataaataaacaatataaagacaattaaagttaaatcgagccaagttattaatacacatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28247 aataaataaacaatataaagacaattaaagttaaatcgagccaagttattaatacacatt 28306
Query: 721 agcagaattagtcacagtaatgcactgatagagaccgagtctaccaaggggacgta-tgt 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 28307 agcagaattagtcacagtaatgcactgatagagaccgagtctaccaaggggacgtagtgt 28366
Query: 780 gttacgaggatgcctgac 797
|| |||||||||||||||
Sbjct: 28367 gtaacgaggatgcctgac 28384
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5583
Number of Sequences: 1807
Number of extensions: 5583
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)